Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015848842.1_cds_XP_016510564.1_23386
CDS Infomation

[gene=LOC107827860] [db_xref=GeneID:107827860] [protein=protein kinase APK1A, chloroplastic-like] [protein_id=XP_016510564.1] [location=join(98325..98466,98862..99065,99150..99218,99379..99447,99524..99586,99675..99997,100114..100614)] [gbkey=CDS]
Sequence

ATGAGTCGAGGTTTCTTTCAAAGCCAGCAACACATATGGGGAGCAGTATCAGCTGGAATT
TTGTTAGTATTTTTTGGTTGCTCAACTTTTTTCTGCTTCAAGAGGAAGCTTTATGCTTGC
TTTAGGTTACCGAACCAAAAAGGAACTCTAAAAGCTGAACAACTGATGTTGAAGCTCTTC
CAGTTGGAACAATTACAGAAGGCAACTAATAATTTCAGTCAAGATTCTCTTGTTGGTTCT
GGTGCATTTGGAAATGTCTACAGAGGAACATTTGATAGGGAGGAAACACTAGCTATAAAA
AAGGCACATGCTGAATCATACATCAGTATTGAAGAGTTTGAAAATGAGATCAGGTTGCTC
TCAAAAGTGAAGCACCGGAACCTCGTTAGTTTGGTGGGGTTCTGCCAAGAAGCTGGGCTT
AAGGGAGCAAAAATTCTGGTGTACGAGTTTGTTCCAAATGGTTCTCTGCTAGACTACATC
ATGGGGAGGGGAGGAAGGAGCTTAACATGGAGGCAGAGAGTGACGATAGCCATTGGAGCT
GCTAAAGGAATAGCTCATCTGCATGAAGGGATCAAGCCAAGTATAATTCATCGGGACATA
AAACCAAGCAACATCTTGGTAGGAGAGAACTTTGAGGCCAAGGTCTCAGATTTTGGGCTT
GTGAAATCGGGTCCTAGTGGGGATCAATCACATGTTAGCAGTCAGATCAAGGGGACACCA
GGGTACCTTGACCCTGCCTACTGTTCATCTCTCCATTTGACTTCATTCACTGATGTCTAT
AGCTATGGTGTTATACTACTGCAGCTTGTTGCTGCTAGACCTGTAGTCGAGAAAAGCAGA
GGTCATCCTAATTTTCATATTATTGATTGGGCAAGACCTAGTTTGGAACGAGGAACCATC
GATGAAATAATAGATGCTAATCTCTTGATGGAACAATGCAACATGGAAATGATGTTCAAA
ATGGGACAGCTTGGTCTGAAATGTGTGGCCAAAGTGCCCAAAGAAAGGCCTACAATGACT
CAAGTATGGCAAGAACTGGAGGCAGCCCTCTTTTCTGCAGAAAATGTCATATTTAAACAA
CCTTCAAATGGTTCCTTAAAATTAGCAAGCTTGTCAAGCGGATCAATGGGTAGTAGAAAC
CATCAACGGAAGCAACTTGATTATTCTCAAAGCTCAGTTAGCATAGATGGCATTAGATTG
CAGAGGTTTCACATGGACATAGATCGCCTATCCTTTGGGAGTGCGAATTTGAGGTGCTTA
GATGCCTATAGTATAAGCATTGAAGACGACTCATTCGACCTGACAGGAACTTCCGAGGAA
ACAACCATGAGTGGAAACGAAGAGTTTAGGCTAACATACGATATCAGTTAA

Peptide Sequence

PEP ID

XP_016510564.1
PEP Infomation

PREDICTED: protein kinase APK1A, chloroplastic-like [Nicotiana tabacum]
Sequence

MSRGFFQSQQHIWGAVSAGILLVFFGCSTFFCFKRKLYACFRLPNQKGTLKAEQLMLKLF
QLEQLQKATNNFSQDSLVGSGAFGNVYRGTFDREETLAIKKAHAESYISIEEFENEIRLL
SKVKHRNLVSLVGFCQEAGLKGAKILVYEFVPNGSLLDYIMGRGGRSLTWRQRVTIAIGA
AKGIAHLHEGIKPSIIHRDIKPSNILVGENFEAKVSDFGLVKSGPSGDQSHVSSQIKGTP
GYLDPAYCSSLHLTSFTDVYSYGVILLQLVAARPVVEKSRGHPNFHIIDWARPSLERGTI
DEIIDANLLMEQCNMEMMFKMGQLGLKCVAKVPKERPTMTQVWQELEAALFSAENVIFKQ
PSNGSLKLASLSSGSMGSRNHQRKQLDYSQSSVSIDGIRLQRFHMDIDRLSFGSANLRCL
DAYSISIEDDSFDLTGTSEETTMSGNEEFRLTYDIS

Transcript Sequence

Gene sequence data has not been registered.